NCHU Course Outline
Course Name (中) 蛋白質體學(6943)
(Eng.) Proteomics
Offering Dept Master Program in Specialty Crops and Metabolomics
Course Type Elective Credits 3 Teacher Ying-Lan Chen
Department Master Program in Specialty Crops and Metabolomics/Graduate Language English Semester 2026-SPRING
Course Description skills for protein identification, quantitation and functional analysis of proteins in organism using proteomic strategy
Prerequisites
self-directed learning in the course Y
Relevance of Course Objectives and Core Learning Outcomes(%) Teaching and Assessment Methods for Course Objectives
Course Objectives Competency Indicators Ratio(%) Teaching Methods Assessment Methods
1.Sample reparation
2.Protein digestion
3.Data analysis of proteomics
topic Discussion/Production
Discussion
Lecturing
Written Presentation
Attendance
Quiz
Course Content and Homework/Schedule/Tests Schedule
Week Course Content
Week 1 Introduction of Proteomics
Week 2 How and why proteomics?
Week 3 Liquid chromatography/Mass spectrometer
Week 4 Discussion/homework
Week 5 Data-dependent acquisition (DDA)
Week 6 Data-independent acquisition (DIA)
Week 7 Proteomic Data analysis
Week 8 Review
Week 9 Midterm Exam
Week 10 Discussion for Midterm Exam
Week 11 Quantitative proteomic analysis
Week 12 Proteomics Software: Xcalibur
Week 13 Software: UniQua and MASCOT search engine
Week 14 In-solution digestion workshop
Week 15 Experiment
Week 16 Final Report
self-directed
learning
   03.Preparing presentations or reports related to industry and academia.

Evaluation
Scoring by commentator
Textbook & other References

Teaching Aids & Teacher's Website
https://www.yinglanchen.com/
Office Hours
Contact via email
Sustainable Development Goals, SDGs(Link URL)
01.No Poverty   04.Quality Educationinclude experience courses:N
Please respect the intellectual property rights and use the materials legally.Please respect gender equality.
Update Date, year/month/day:2026/02/21 23:29:50 Printed Date, year/month/day:2026 / 4 / 19
The second-hand book website:http://www.myub.com.tw/