| Relevance of Course Objectives and Core Learning Outcomes(%) |
Teaching and Assessment Methods for Course Objectives |
| Course Objectives |
Competency Indicators |
Ratio(%) |
Teaching Methods |
Assessment Methods |
| 理解分子演化基本知識和應用方法 |
| 1. Improve theoretical knowledge and critical thinking |
| 4. |
|
|
| topic Discussion/Production |
| Exercises |
| Lecturing |
|
| Written Presentation |
| Attendance |
| Oral Presentation |
| Quiz |
|
| Course Content and Homework/Schedule/Tests Schedule |
| Week |
Course Content |
| Week 1 |
課程概述
分子演化簡史 (Introduction to the Course and History of Molecular Evolution)
基因與突變 (Gene and Mutation)、族群遺傳學 (Population Genetics) |
| Week 2 |
族群遺傳學 (Population Genetics) 、中性演化 (Neutral Evolution) |
| Week 3 |
自然選汰 (Natural Selection) |
| Week 4 |
演化模型 (Evolutionary Models) |
| Week 5 |
親緣關係樹 (Phylogenetic Tree) |
| Week 6 |
分子親緣關係重建中常使用的數據資料類型與技術及常用資料庫
(Commonly Used Dataset Types, Database and Relevant Technologies in Molecular Phylogenetic Reconstruction)
|
| Week 7 |
分子親緣數據資料處理：序列比對與資料分區
(Data Processing in Molecular Phylogenetics: Alignment and Partitions) |
| Week 8 |
分子親緣重建的方法和類別：基於遺傳距離的方法和最大簡約法
(Methods in Molecular Phylogenetics: Distance-Based Methods and Maximum Parsimony) |
| Week 9 |
期中考 (Mid-term) |
| Week 10 |
分子親緣重建的方法和類別：最大似然法與拔靴法和操作
(Methods in Molecular Phylogenetics: Maximum Likelihood and Bootstrapping) |
| Week 11 |
分子親緣重建的方法和類別：貝氏親緣分析
(Methods in Molecular Phylogenetics: Bayesian Phylogenetic Analysis) |
| Week 12 |
分子定年分析 (Molecular Dating Analysis) |
| Week 13 |
應用分子演化分析於物種鑑定 (Molecular Species Delimitation) |
| Week 14 |
祖先特徵重建估算 (Reconstruct Ancestral Character State) |
| Week 15 |
根據分子親緣關係樹進行演化速率分析
(Diversification Rate Estimation based on Time-scaled Phylogenetic Trees) |
| Week 16 |
期末分組報告 (Final Presentation) |
self-directed
learning |
03.Preparing presentations or reports related to industry and academia.
將要求學生利用課堂學習知識，自行分析資料以進行分組口頭報告並撰寫繳交書面報告，自主學習內容達3學分6小時之要求 |
|
| Evaluation |
期中考 (40%); 期末分組口頭報告 (25%);期末分組書面報告 (25%); 出席率 (10%)
Mid-Term (40%); Final Group Oral Presentation (25%); Final Group Written Presentation (25%); Presence (10%) |
| Textbook & other References |
Bromham, L. 2016. An Introduction to Molecular Evolution and Phylogenetics (2nd edn). Oxford University Press.
Graur, D. and Li, W.-H. 1999. Fundamentals of Molecular Evolution (2nd edn). Oxford University Press.
|
| Teaching Aids & Teacher's Website |
| I-Learning |
| Office Hours |
|
| Sustainable Development Goals, SDGs(Link URL) |
| 04.Quality Education | include experience courses：N |
|