國立中興大學教學大綱
課程名稱 (中) 作物生理、生態遺傳學(7062)
(Eng.) Plant Physiological and Ecological Genetics
開課單位 農藝系
課程類別 選修 學分 3 授課教師 古新梅
選課單位 農藝系 / 碩士班 授課使用語言 中文 英文/EMI 開課學期 1122
課程簡述 介紹virus induced genome editing(VIGE)策略研究作物抗逆境機制,教導學生了解作物對抗逆境相關的理論、研究邏輯思考與判斷能力。課程須特定專業背景知識,建議修過遺傳、分子生物學、植物病毒學及植物生物技術相關課程的學生選課。
Introduction of an advanced level of crop tolerance against diverse stresses using VIGE approaches. In addition, using active teacher-student interaction-based method, students could understand the logical thinking of science underlying individual experiments of different case studies.
先修課程名稱
課程含自主學習 Y
課程與核心能力關聯配比(%) 課程目標之教學方法與評量方法
課程目標 核心能力 配比(%) 教學方法 評量方法
1.具備生物領域基本學科之知識及生物技術之實作能力。50%
2.具備遺傳育種學之知識及作物改良之實作能力。50%


習作
討論
講授
書面報告
口頭報告
作業
授課內容(單元名稱與內容、習作/每週授課、考試進度-共18週)
週次 授課內容
第1週 1.Ratcliff et al 2001 Tobacco rattle virus as a vector for analysis of gene function by silencing. The Plant Journal 25:237-245; Rossner C, Lotz D, and Becker A 2022 VIGS goes viral: How VIGS transforms our understanding of plant science. Ann Rev Plant Biol 73: (pp703-716)
第2週 2.Senthil-Kumar et al 2007 A systematic study to determine the extent of gene silencing in Nicotiana benthamiana and other Solanaceae species when heterologous gene sequences are used for virus-induced gene silencing. New Phytologist 176: 782–791
第3週 3.Shi et al 2021 A Methodological Advance of Tobacco Rattle Virus-Induced Gene Silencing for Functional Genomics in Plants. Front. Plant Sci. 12:671091. doi: 10.3389/fpls.2021.671091;
第4週 4.Zhang 2020 Genome editing with the CRISPR-Cas system: an art ethics and global regulatory perspective. Plant biotechnol J 18: 1651-1669; Awan 2023 Viral vectors as carriers of genome-editing reagents. Trends in Plant Science 28: 981-983; Ali 2015 Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System. Molecular Plant 8, 1288–1291 (ref Zhang 2022 Virus-Induced Gene Editing and Its Applications in Plants. Int. J. Mol. Sci. 23, 10202. https://doi.org/10.3390/ ijms231810202)
第5週 5.Tran, M. T., Doan, D. T. H., Kim, J., Song, Y. J., Sung, Y. W., Das, S., et al. (2021). CRISPR/Cas9-based precise excision of SlHyPRP1 domain(s) to obtain salt stress-tolerant tomato. Plant Cell Rep. 40, 999–1011. doi: 10.1007/s00299-020-02622-z
第6週 6.Liu, L., Zhang, J., Xu, J., Li, Y., Guo, L., Wang, Z., et al. (2020). CRISPR/Cas9 targeted mutagenesis of SlLBD40, a lateral organ boundaries domain transcription factor, enhances drought tolerance in tomato. Plant Sci. 301, 110683. doi: 10.1016/ j.plantsci.2020.110683;
第7週 7.自主學習: 應與老師或同學進行討論並應研讀VIGE之理論及方法並進行整理。
第8週 8.期中考週
第9週 9.Wang, P., Luo, Q., Yang, W., Ahammed, G. J., Ding, S., Chen, X., et al. (2021). A novel role of pipecolic acid biosynthetic pathway in drought tolerance through the antioxidant system in tomato. Antioxidants (Basel) 10 (12), 1923. doi: 10.3390/antiox10121923
第10週 10.Zhang 2018 Suppressing type 2C protein phosphatases alters fruit ripening and the stress response in tomato. Plant Cell Physiol. 2018, 59, 142–154.drought
第11週 11.Sun, 2017 Suppressing ABA uridine diphosphate glucosyltransferase (Sl UGT 75C1) alters fruit ripening and the stress response in tomato. Plant J. 91, 574–589 drought
第12週 12.Yin, W.; Hu, Z.; Cui, B.; Guo, X.; Hu, J.; Zhu, Z.; Chen, G. 2017 Suppression of the MADS-box gene SlMBP8 accelerates fruit ripening of tomato (Solanum lycopersicum). Plant Physiol. Biochem. 118, 235–244 Drought and salt
第13週 13.Campos, J.F.; Cara, B.; Pérez-Martín, F.; Pineda, B.; Egea, I.; Flores, F.B.; Fernandez-Garcia, N.; Capel, J.; Moreno, V.; Angosto, T. 2016 The tomato mutant ars1 (altered response to salt stress 1) identifies an R1-type MYB transcription factor involved in stomatal closure under salt acclimation. Plant Biotechnol. J. 14, 1345–1356.
第14週 14.Cai, X.; Zhang, C.; Shu, W.; Ye, Z.; Li, H.; Zhang, Y. 2016 The transcription factor SlDof22 involved in ascorbate accumulation and salinity stress in tomato. Biochem. Biophys. Res. Commun. 2016, 474, 736–741
第15週 15.Yang, Y.; Tang, N.; Xian, Z.; Li, Z. 2015 Two SnRK2 protein kinases genes play a negative regulatory role in the osmotic stress response in tomato. Plant Cell Tissue Organ Cult. PCTOC 122, 421–43
第16週 16.Xu, X.-X.; Hu, Q.; Yang, W.-N.; Jin, Y. 2017 The roles of cell wall invertase inhibitor in regulating chilling tolerance in tomato. BMC Plant Biol. 17, 195.
第17週 17.自主學習: 應與老師或同學進行討論並應研讀耐逆境之理論及思考如何以VIGE策略設計試驗,進行思考及整理。
第18週 期末考週
學習評量方式
1.期中考及期末報告 (50%)
2.討論(50%)


教科書&參考書目(書名、作者、書局、代理商、說明)
references discussion in class
課程教材(教師個人網址請列在本校內之網址)

課程輔導時間
Fri. 10am-11am


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