| 課程與核心能力關聯配比(%) |
課程目標之教學方法與評量方法 |
| 課程目標 |
核心能力 |
配比(%) |
教學方法 |
評量方法 |
The primary goals of this course are:
- To learn how the genomics data are being produced.
- To learn what type of information a genome can provide.
- To learn basic bioinformatics resources and quantitative concepts used for analyzing genome information.
- To learn how genomic data are being used to gain new insights into biology and how are these information used for agriculture application. |
| 1.農業專業能力 Professional agricultural knowledge |
| 2.論文研究 Master Thesis |
| 3.邏輯組織以及資料統整與分析 Logic/ data collection and analysis |
| 4.以英語表達與溝通的能力 Using English as the means for communication |
| 5.國際觀 Global Perspective |
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| 授課內容(單元名稱與內容、習作/每週授課、考試進度-共16週加自主學習) |
| 週次 |
授課內容 |
| 第1週 |
Basic concepts and history
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| 第2週 |
Genome structure |
| 第3週 |
Mapping genomes – Cytological maps, genetic map, physical map |
| 第4週 |
Sequencing genomes - Evolution of sequencing technology (Sanger Chain termination sequencing, traditional method and automation) |
| 第5週 |
Sequencing genomes - Evolution of sequencing technology (NGS)
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| 第6週 |
Sequencing genomes -How is a genome put together from the sequences (genome assembly) |
| 第7週 |
Genome annotation
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| 第8週 |
Functional Genomics - transcriptome I |
| 第9週 |
Functional Genomics - transcriptome II |
| 第10週 |
Mid-term exam |
| 第11週 |
Assessing genome variations |
| 第12週 |
Comparative Genomics – The evolution aspect of genomics |
| 第13週 |
Metagenomics |
| 第14週 |
Genomics and Agriculture – cases study |
| 第15週 |
Class project discussion |
| 第16週 |
Class project discussion
Class project discussion
Final Exam |
自主學習
內容 |
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| 學習評量方式 |
Class project report and exams.
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| 教科書＆參考書目(書名、作者、書局、代理商、說明) |
Textbooks are not required, however the following two books provide good information of the topics that we are going to cover:
A Primer in Genome Science. By Greg Gibson and Spencer V. Muse. Sinauer Associates, INC. Publishers, Sunderland, MA.
Genomics. By Philip N. Benfey and Alexander D. Protopapas Pearson Prentice Hall
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| 課程教材（教師個人網址請列在本校內之網址） |
| Teaching materials will be available on the class portal of Learning website. |
| 課程輔導時間 |
| Monday 1-3 pm |
| 聯合國全球永續發展目標(連結網址) |
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